Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.1■□□□□ 0.49
PCDHB2Q9Y5E7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AL391256.1-201ENST00000443260 1855 ntBASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 SPDYE7P-202ENST00000420373 878 ntBASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHB2Q9Y5E7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHB2Q9Y5E7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 AC125807.1-201ENST00000483097 614 ntBASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 OR6D1P-203ENST00000641209 4860 ntBASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
PCDHB2Q9Y5E7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 PCDHA14-201ENST00000506751 2298 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 MIR943-201ENST00000401286 94 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 AC107890.1-201ENST00000422478 521 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 AC055876.3-201ENST00000431496 288 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms