Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 AC134043.2-201ENST00000624206 2238 ntBASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RTCBQ9Y3I0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.65■□□□□ 0.9
RTCBQ9Y3I0 AL391256.1-201ENST00000443260 1855 ntBASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
RTCBQ9Y3I0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 ACTBP11-201ENST00000436287 1126 ntBASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
RTCBQ9Y3I0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 USP32P1-208ENST00000506594 1164 ntBASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 GPAA1P2-202ENST00000606848 1787 ntBASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 AL133338.1-201ENST00000565695 1517 ntBASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTCBQ9Y3I0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTCBQ9Y3I0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms