Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AC011840.4-201ENST00000578471 627 ntBASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KCNIP3Q9Y2W7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 KRT8P49-201ENST00000604166 1432 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 HBZP1-201ENST00000354915 429 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC009533.2-201ENST00000543664 586 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC013467.2-201ENST00000605472 835 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 GGT4P-201ENST00000623672 1708 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC132938.5-201ENST00000624980 1813 ntBASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.92□□□□□ -0.18
KCNIP3Q9Y2W7 AC006449.6-201ENST00000612330 2296 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms