Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 FO393414.2-201ENST00000405153 598 ntBASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 PIN1P1-201ENST00000412108 996 ntBASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 AL512361.1-201ENST00000554200 418 ntBASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 AC008738.7-201ENST00000609744 511 ntBASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.88■□□□□ 0.61
SYNPO2Q9UMS6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 EEF1DP4-201ENST00000446006 880 ntBASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYNPO2Q9UMS6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 AC114501.2-201ENST00000439631 535 ntBASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 CRB3P1-201ENST00000449338 276 ntBASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 MIR6069-201ENST00000620069 79 ntBASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.86■□□□□ 0.61
SYNPO2Q9UMS6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 ME2P1-201ENST00000426028 1970 ntBASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 SPDYE22P-201ENST00000582158 798 ntBASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.85■□□□□ 0.61
SYNPO2Q9UMS6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms