Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CALYQ9NYX4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AC145285.3-201ENST00000564603 959 ntBASIC13.72□□□□□ -0.21
CALYQ9NYX4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AC021097.1-201ENST00000607902 574 ntBASIC13.72□□□□□ -0.21
CALYQ9NYX4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 LINC01144-201ENST00000626198 1710 ntBASIC13.72□□□□□ -0.21
CALYQ9NYX4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CALYQ9NYX4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CALYQ9NYX4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 IL9RP2-201ENST00000423948 1312 ntBASIC13.71□□□□□ -0.21
CALYQ9NYX4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 FDX1P1-201ENST00000449115 551 ntBASIC13.71□□□□□ -0.21
CALYQ9NYX4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 AC034105.1-201ENST00000563488 319 ntBASIC13.71□□□□□ -0.21
CALYQ9NYX4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 AC023141.13-201ENST00000604991 943 ntBASIC13.71□□□□□ -0.21
CALYQ9NYX4 AC007064.4-201ENST00000637740 555 ntBASIC13.71□□□□□ -0.21
CALYQ9NYX4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CALYQ9NYX4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CALYQ9NYX4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CALYQ9NYX4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CALYQ9NYX4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.71□□□□□ -0.22
CALYQ9NYX4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CALYQ9NYX4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CALYQ9NYX4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.7□□□□□ -0.22
CALYQ9NYX4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms