Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC008751.2-201ENST00000597885 980 ntBASIC19.6■□□□□ 0.73
RNF216Q9NWF9 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC19.6■□□□□ 0.73
RNF216Q9NWF9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 AL512506.2-201ENST00000624472 458 ntBASIC19.6■□□□□ 0.73
RNF216Q9NWF9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF216Q9NWF9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC016831.2-201ENST00000417179 352 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 HNF4GP1-201ENST00000430567 1249 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 RNA5SP419-201ENST00000515908 135 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 KRT18P58-201ENST00000527480 1120 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC140658.4-201ENST00000561990 352 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AP001357.1-201ENST00000586304 1053 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC132216.1-201ENST00000610375 1158 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC010872.1-201ENST00000624225 675 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AL033527.5-201ENST00000641382 801 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC084018.2-201ENST00000613093 2607 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC012317.2-201ENST00000623305 2251 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 AC125634.1-201ENST00000438758 1403 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 INTS4P1-201ENST00000438455 1935 ntBASIC19.59■□□□□ 0.73
RNF216Q9NWF9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF216Q9NWF9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 AC120338.1-201ENST00000625074 1541 ntBASIC19.58■□□□□ 0.73
RNF216Q9NWF9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.58■□□□□ 0.73
RNF216Q9NWF9 CXCL13-201ENST00000286758 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF216Q9NWF9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RNF216Q9NWF9 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF216Q9NWF9 TPRKBP1-201ENST00000456243 481 ntBASIC19.58■□□□□ 0.72
RNF216Q9NWF9 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RNF216Q9NWF9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms