RNA–Protein interactions for RNA: ENST00000428896.1

LINC01611-201, Transcript of long intergenic non-protein coding RNA 1611, humanhuman

TSL 5 BASIC

Gene LINC01611, Length 477 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01611-201ENST00000428896 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
LINC01611-201ENST00000428896 CHIC1Q5VXU3 224 aa28.77■■■□□ 2.2
LINC01611-201ENST00000428896 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
LINC01611-201ENST00000428896 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
LINC01611-201ENST00000428896 FOXD1Q16676 465 aa23.37■■□□□ 1.33
LINC01611-201ENST00000428896 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
LINC01611-201ENST00000428896 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
LINC01611-201ENST00000428896 ADRA2BP18089 450 aa22.4■■□□□ 1.18
LINC01611-201ENST00000428896 PIAS4Q8N2W9 510 aaPredicted RBP22■■□□□ 1.11
LINC01611-201ENST00000428896 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
LINC01611-201ENST00000428896 MSH5O43196 834 aa21.54■■□□□ 1.04
LINC01611-201ENST00000428896 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
LINC01611-201ENST00000428896 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
LINC01611-201ENST00000428896 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
LINC01611-201ENST00000428896 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
LINC01611-201ENST00000428896 CNKSR2Q8WXI2 1034 aa19.97■□□□□ 0.79
LINC01611-201ENST00000428896 KCNA4P22459 653 aa19.94■□□□□ 0.78
LINC01611-201ENST00000428896 NCBP3Q53F19 620 aaKnown RBP19.93■□□□□ 0.78
LINC01611-201ENST00000428896 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
LINC01611-201ENST00000428896 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
LINC01611-201ENST00000428896 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
LINC01611-201ENST00000428896 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
LINC01611-201ENST00000428896 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
LINC01611-201ENST00000428896 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
LINC01611-201ENST00000428896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
LINC01611-201ENST00000428896 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
LINC01611-201ENST00000428896 CACNB1Q02641 598 aaPredicted RBP18.5■□□□□ 0.55
LINC01611-201ENST00000428896 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
LINC01611-201ENST00000428896 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
LINC01611-201ENST00000428896 FOXD4L1Q9NU39 408 aa18.35■□□□□ 0.53
LINC01611-201ENST00000428896 ZBTB22O15209 634 aa18.34■□□□□ 0.53
LINC01611-201ENST00000428896 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
LINC01611-201ENST00000428896 C1QBPQ07021 282 aaKnown RBP18.21■□□□□ 0.51
LINC01611-201ENST00000428896 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
LINC01611-201ENST00000428896 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
LINC01611-201ENST00000428896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
LINC01611-201ENST00000428896 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
LINC01611-201ENST00000428896 SAMD1Q6SPF0 538 aaPredicted RBP17.96■□□□□ 0.47
LINC01611-201ENST00000428896 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
LINC01611-201ENST00000428896 CAPN15O75808 1086 aa17.86■□□□□ 0.45
LINC01611-201ENST00000428896 APLP2Q06481 763 aa17.85■□□□□ 0.45
LINC01611-201ENST00000428896 TRHP20396 242 aaPredicted RBP17.76■□□□□ 0.43
LINC01611-201ENST00000428896 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
LINC01611-201ENST00000428896 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
LINC01611-201ENST00000428896 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
LINC01611-201ENST00000428896 DSG3P32926 999 aa17.54■□□□□ 0.4
LINC01611-201ENST00000428896 ABCB7O75027 752 aa17.53■□□□□ 0.4
LINC01611-201ENST00000428896 POLA2Q14181 598 aa17.41■□□□□ 0.38
LINC01611-201ENST00000428896 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
LINC01611-201ENST00000428896 FBLN2P98095 1184 aa16.95■□□□□ 0.3
LINC01611-201ENST00000428896 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
LINC01611-201ENST00000428896 POTEHQ6S545 545 aa16.83■□□□□ 0.28
LINC01611-201ENST00000428896 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
LINC01611-201ENST00000428896 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
LINC01611-201ENST00000428896 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
LINC01611-201ENST00000428896 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
LINC01611-201ENST00000428896 SPDYE2Q495Y8 402 aa16.58■□□□□ 0.24
LINC01611-201ENST00000428896 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
LINC01611-201ENST00000428896 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
LINC01611-201ENST00000428896 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
LINC01611-201ENST00000428896 FKBP8Q14318 412 aa16.43■□□□□ 0.22
LINC01611-201ENST00000428896 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
LINC01611-201ENST00000428896 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC01611-201ENST00000428896 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
LINC01611-201ENST00000428896 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
LINC01611-201ENST00000428896 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
LINC01611-201ENST00000428896 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
LINC01611-201ENST00000428896 PROM2Q8N271 834 aa16.12■□□□□ 0.17
LINC01611-201ENST00000428896 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
LINC01611-201ENST00000428896 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
LINC01611-201ENST00000428896 PRR29P0C7W0 189 aa15.95■□□□□ 0.14
LINC01611-201ENST00000428896 FXR2P51116 673 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC01611-201ENST00000428896 PIP4P2Q8N4L2 257 aa15.85■□□□□ 0.13
LINC01611-201ENST00000428896 FBXO3Q9UK99 471 aa15.8■□□□□ 0.12
LINC01611-201ENST00000428896 CHADLQ6NUI6 762 aa15.79■□□□□ 0.12
LINC01611-201ENST00000428896 PRKAR2AP13861 404 aaKnown RBP15.77■□□□□ 0.12
LINC01611-201ENST00000428896 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
LINC01611-201ENST00000428896 MIER1Q8N108 512 aa15.69■□□□□ 0.1
LINC01611-201ENST00000428896 PLCD3Q8N3E9 789 aa15.64■□□□□ 0.09
LINC01611-201ENST00000428896 VASPP50552 380 aaPredicted RBP15.61■□□□□ 0.09
LINC01611-201ENST00000428896 PLEKHG5O94827 1062 aa15.56■□□□□ 0.08
LINC01611-201ENST00000428896 FARP1Q9Y4F1 1045 aaPredicted RBP15.56■□□□□ 0.08
LINC01611-201ENST00000428896 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
LINC01611-201ENST00000428896 SP7Q8TDD2 431 aaPredicted RBP15.5■□□□□ 0.07
LINC01611-201ENST00000428896 KLHL34Q8N239 644 aa15.44■□□□□ 0.06
LINC01611-201ENST00000428896 HAX1O00165 279 aa15.42■□□□□ 0.06
LINC01611-201ENST00000428896 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
LINC01611-201ENST00000428896 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
LINC01611-201ENST00000428896 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
LINC01611-201ENST00000428896 C19orf67A6NJJ6 358 aa15.32■□□□□ 0.04
LINC01611-201ENST00000428896 CD44P16070 742 aaKnown RBP15.3■□□□□ 0.04
LINC01611-201ENST00000428896 EVX2Q03828 476 aa15.29■□□□□ 0.04
LINC01611-201ENST00000428896 NUBP1P53384 320 aa15.26■□□□□ 0.03
LINC01611-201ENST00000428896 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
LINC01611-201ENST00000428896 SPOCK2Q92563 424 aa15.24■□□□□ 0.03
LINC01611-201ENST00000428896 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
LINC01611-201ENST00000428896 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
LINC01611-201ENST00000428896 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
LINC01611-201ENST00000428896 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
LINC01611-201ENST00000428896 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms