Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 NUS1P2-201ENST00000417358 873 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 IGHV3-47-201ENST00000425060 335 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 FAM197Y8-203ENST00000450145 560 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 AC013467.2-201ENST00000605472 835 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 TP73-AS1-207ENST00000624167 988 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 AC006058.4-201ENST00000624016 1670 ntBASIC15.83■□□□□ 0.12
CCM2LQ9NUG4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AC003669.1-201ENST00000334569 611 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 RNA5SP419-201ENST00000515908 135 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AL138831.2-201ENST00000606564 490 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AL136379.1-201ENST00000623471 2642 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AC132938.5-201ENST00000624980 1813 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 AC013268.4-201ENST00000637413 2228 ntBASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCM2LQ9NUG4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 MIR940-201ENST00000401276 94 ntBASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.81■□□□□ 0.12
CCM2LQ9NUG4 AL592071.1-201ENST00000611956 408 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms