Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AL513190.1-201ENST00000621254 727 ntBASIC14.52□□□□□ -0.09
CDH20Q9HBT6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 AL139011.1-202ENST00000642063 584 ntBASIC14.52□□□□□ -0.09
CDH20Q9HBT6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH20Q9HBT6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AC106886.4-201ENST00000623557 2502 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AC007326.2-201ENST00000624224 7579 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AL671883.3-201ENST00000603274 991 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AL031055.1-201ENST00000606362 631 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 AC092865.6-201ENST00000642101 219 ntBASIC14.51□□□□□ -0.09
CDH20Q9HBT6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDH20Q9HBT6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AL603756.1-201ENST00000606511 2163 ntBASIC14.5□□□□□ -0.09
CDH20Q9HBT6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 PGAM5P1-201ENST00000518923 814 ntBASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH20Q9HBT6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms