Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AL353135.1-201ENST00000606729 504 ntBASIC14.28□□□□□ -0.12
NICN1Q9BSH3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NICN1Q9BSH3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NICN1Q9BSH3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 POM121L3P-201ENST00000419331 1163 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 BX005266.1-201ENST00000473402 457 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AC104819.1-201ENST00000504587 486 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AP000867.3-201ENST00000524675 377 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AC010331.1-201ENST00000611423 582 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 GGT4P-201ENST00000623672 1708 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 AL512652.2-201ENST00000625156 1716 ntBASIC14.27□□□□□ -0.13
NICN1Q9BSH3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NICN1Q9BSH3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AL031731.1-201ENST00000642131 2094 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 NUS1P2-201ENST00000417358 873 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PCED1CP-201ENST00000419887 785 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MIR3180-1-201ENST00000580374 94 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MIR3180-3-201ENST00000584616 94 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AC092329.2-201ENST00000598402 547 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 AC006449.6-201ENST00000612330 2296 ntBASIC14.26□□□□□ -0.13
NICN1Q9BSH3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NICN1Q9BSH3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NICN1Q9BSH3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms