Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CPNE1Q99829 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.59■□□□□ 0.25
CPNE1Q99829 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CPNE1Q99829 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CPNE1Q99829 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.58■□□□□ 0.25
CPNE1Q99829 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.58■□□□□ 0.25
CPNE1Q99829 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CPNE1Q99829 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE1Q99829 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.58■□□□□ 0.24
CPNE1Q99829 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.58■□□□□ 0.24
CPNE1Q99829 OR7E14P-202ENST00000530490 1290 ntBASIC16.58■□□□□ 0.24
CPNE1Q99829 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.58■□□□□ 0.24
CPNE1Q99829 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CPNE1Q99829 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.58■□□□□ 0.24
CPNE1Q99829 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE1Q99829 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE1Q99829 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.58■□□□□ 0.24
CPNE1Q99829 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.58■□□□□ 0.24
CPNE1Q99829 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CPNE1Q99829 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CPNE1Q99829 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 DUSP5P1-201ENST00000441325 1139 ntBASIC16.57■□□□□ 0.24
CPNE1Q99829 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.57■□□□□ 0.24
CPNE1Q99829 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.57■□□□□ 0.24
CPNE1Q99829 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPNE1Q99829 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.57■□□□□ 0.24
CPNE1Q99829 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CPNE1Q99829 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.57■□□□□ 0.24
CPNE1Q99829 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CPNE1Q99829 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CPNE1Q99829 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 AC010491.1-201ENST00000563101 2797 ntBASIC16.56■□□□□ 0.24
CPNE1Q99829 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CPNE1Q99829 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.56■□□□□ 0.24
CPNE1Q99829 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CPNE1Q99829 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CPNE1Q99829 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms