Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AC096633.1-201ENST00000422446 749 ntBASIC12.6□□□□□ -0.39
AP1S3Q96PC3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 RASA4DP-201ENST00000460726 1199 ntBASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 GCSHP2-201ENST00000560971 527 ntBASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AC010947.1-201ENST00000623454 693 ntBASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
AP1S3Q96PC3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MTCL1P1-201ENST00000446207 792 ntBASIC12.59□□□□□ -0.39
AP1S3Q96PC3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CYP2D8P-201ENST00000433633 1490 ntBASIC12.59□□□□□ -0.39
AP1S3Q96PC3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
AP1S3Q96PC3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
AP1S3Q96PC3 AC092053.1-201ENST00000605787 1936 ntBASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms