Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.49□□□□□ -0.25
ZNF48Q96MX3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 PCDHA12-202ENST00000613593 2588 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 UGT1A2P-201ENST00000454886 866 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC140878.1-201ENST00000565277 250 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 MIR3909-201ENST00000579518 119 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 MIR6080-201ENST00000617359 66 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC008267.7-201ENST00000624570 1194 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 FRMD8P1-201ENST00000440433 1524 ntBASIC13.48□□□□□ -0.25
ZNF48Q96MX3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ZNF48Q96MX3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 MIR346-201ENST00000362234 95 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 MIR661-201ENST00000384842 89 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 SPDYE7P-202ENST00000420373 878 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 ALG1L8P-201ENST00000533887 760 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AL138918.1-201ENST00000568306 659 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AL390754.1-201ENST00000619088 582 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AP001350.2-201ENST00000625104 1094 ntBASIC13.47□□□□□ -0.25
ZNF48Q96MX3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.47□□□□□ -0.25
ZNF48Q96MX3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms