Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 AC106795.1-205ENST00000512851 1056 ntBASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 AL022326.1-202ENST00000641533 845 ntBASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 GPAA1P2-202ENST00000606848 1787 ntBASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 AC006504.4-201ENST00000592118 1568 ntBASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHAMP1Q96JM3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ATP5G2P1-201ENST00000433580 426 ntBASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 AC107918.2-201ENST00000530817 355 ntBASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 PCGF3-213ENST00000620529 1899 ntBASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHAMP1Q96JM3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC069148.1-201ENST00000608741 768 ntBASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC012313.10-201ENST00000623509 926 ntBASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC131009.4-201ENST00000624048 1740 ntBASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHAMP1Q96JM3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms