Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 LINC00265-3P-201ENST00000447588 903 ntBASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PAWRP1-201ENST00000451083 565 ntBASIC15.8■□□□□ 0.12
LRRC58Q96CX6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 AC074051.2-201ENST00000565115 352 ntBASIC15.8■□□□□ 0.12
LRRC58Q96CX6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 AP002414.4-201ENST00000589764 1148 ntBASIC15.8■□□□□ 0.12
LRRC58Q96CX6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LRRC58Q96CX6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 PRAL-201ENST00000624952 3286 ntBASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AC010654.1-201ENST00000615722 808 ntBASIC15.79■□□□□ 0.12
LRRC58Q96CX6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AC131009.4-201ENST00000624048 1740 ntBASIC15.79■□□□□ 0.12
LRRC58Q96CX6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRC58Q96CX6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 AC013268.4-201ENST00000637413 2228 ntBASIC15.78■□□□□ 0.12
LRRC58Q96CX6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRC58Q96CX6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms