Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 GUSBP12-201ENST00000513727 720 ntBASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 AC145285.6-201ENST00000604632 637 ntBASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 AC011558.1-201ENST00000623459 338 ntBASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNIH3Q8TBE1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SSR4P1-203ENST00000599569 2260 ntBASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AC148477.5-201ENST00000625164 1645 ntBASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AL353801.3-201ENST00000609898 542 ntBASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 AC136621.1-201ENST00000624017 2304 ntBASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.18■□□□□ 0.02
CNIH3Q8TBE1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 FAM45BP-202ENST00000592932 1624 ntBASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 AC069224.1-201ENST00000566372 1715 ntBASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CNIH3Q8TBE1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms