Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX2-3Q8TAU0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 AC073439.1-201ENST00000624121 1774 ntBASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 IGHV3-42-201ENST00000520410 361 ntBASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 AC021097.1-201ENST00000607902 574 ntBASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 PCDHB19P-201ENST00000570871 2371 ntBASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX2-3Q8TAU0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 NME2P1-201ENST00000426182 414 ntBASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 AKAP8P1-201ENST00000434743 1349 ntBASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NKX2-3Q8TAU0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 FO538757.1-201ENST00000623083 1397 ntBASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
NKX2-3Q8TAU0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms