Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 GGT4P-201ENST00000623672 1708 ntBASIC14.52□□□□□ -0.09
CPEB3Q8NE35 AL118508.1-201ENST00000613502 2345 ntBASIC14.52□□□□□ -0.09
CPEB3Q8NE35 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPEB3Q8NE35 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 AC023274.1-201ENST00000418278 595 ntBASIC14.51□□□□□ -0.09
CPEB3Q8NE35 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PGAM5P1-201ENST00000518923 814 ntBASIC14.51□□□□□ -0.09
CPEB3Q8NE35 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PDPK2P-202ENST00000562415 1191 ntBASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 AC092919.2-201ENST00000623631 1645 ntBASIC14.51□□□□□ -0.09
CPEB3Q8NE35 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
CPEB3Q8NE35 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 AC005052.1-201ENST00000625181 2492 ntBASIC14.5□□□□□ -0.09
CPEB3Q8NE35 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 PMS2P7-201ENST00000506558 1336 ntBASIC14.5□□□□□ -0.09
CPEB3Q8NE35 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 AC074386.1-202ENST00000463561 864 ntBASIC14.5□□□□□ -0.09
CPEB3Q8NE35 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CPEB3Q8NE35 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms