Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 AL391256.1-201ENST00000443260 1855 ntBASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDH20Q8N6Y1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 DOC2GP-204ENST00000639052 2548 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AC005915.1-201ENST00000624912 2018 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 TFAMP1-201ENST00000412727 736 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SPDYE11-202ENST00000450699 704 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AC092183.1-201ENST00000469884 875 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SPDYE9P-201ENST00000570642 692 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SPDYE10P-202ENST00000612005 668 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SPDYE8P-202ENST00000612377 668 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 WASH6P-202ENST00000359512 1437 ntBASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDH20Q8N6Y1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 TIMM8BP1-201ENST00000452384 211 ntBASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AL135744.1-201ENST00000565098 629 ntBASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AC022145.2-201ENST00000598203 171 ntBASIC16.92■□□□□ 0.3
PCDH20Q8N6Y1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms