Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 UXT-AS1-201ENST00000590504 1525 ntBASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAM1L1Q8N609 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 ME2P1-201ENST00000426028 1970 ntBASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAM1L1Q8N609 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 AC142381.1-201ENST00000426099 345 ntBASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 AC023141.5-201ENST00000458585 616 ntBASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 AC093520.2-201ENST00000561830 333 ntBASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 ALOX12P2-203ENST00000570921 1945 ntBASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAM1L1Q8N609 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 KRT18P32-201ENST00000424695 1287 ntBASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAM1L1Q8N609 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AC005622.1-201ENST00000636801 1703 ntBASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAM1L1Q8N609 SLC25A39P2-201ENST00000537614 270 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms