Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 IGHV3-62-201ENST00000520057 340 ntBASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 AC008267.7-201ENST00000624570 1194 ntBASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.12■□□□□ 0.33
PHTF2Q8N3S3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 MIR346-201ENST00000362234 95 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 SLC25A39P2-201ENST00000537614 270 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 CYP2A7P1-201ENST00000595391 815 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 TUBB3P1-201ENST00000405796 1332 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 UXT-AS1-201ENST00000590504 1525 ntBASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.11■□□□□ 0.33
PHTF2Q8N3S3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 AC016027.1-202ENST00000607927 1699 ntBASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 AP000842.3-202ENST00000569238 1080 ntBASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 AC008677.1-201ENST00000519230 1561 ntBASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 LINC00895-201ENST00000629028 1637 ntBASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
PHTF2Q8N3S3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PHTF2Q8N3S3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms