Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NPAS3Q8IXF0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS3Q8IXF0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS3Q8IXF0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
NPAS3Q8IXF0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS3Q8IXF0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AC098614.1-201ENST00000368528 745 ntBASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 ARSEP1-201ENST00000420443 635 ntBASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NPAS3Q8IXF0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 DGCR5-201ENST00000399539 862 ntBASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ATP5G2P4-201ENST00000442175 420 ntBASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 MIR6752-201ENST00000618442 71 ntBASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS3Q8IXF0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 AC093724.1-201ENST00000448659 1027 ntBASIC17.02■□□□□ 0.32
NPAS3Q8IXF0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms