Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 AC079781.3-201ENST00000449110 356 ntBASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 AL031008.1-201ENST00000619963 541 ntBASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CRLF3Q8IUI8 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 AC092384.3-202ENST00000564646 2873 ntBASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 DUX4L17-201ENST00000557360 1267 ntBASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CRLF3Q8IUI8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 AKR1C7P-201ENST00000305623 895 ntBASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CRLF3Q8IUI8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms