Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AL355877.3-201ENST00000622820 899 ntBASIC14.82□□□□□ -0.04
LRRC28Q86X40 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 AP005117.1-201ENST00000584346 1413 ntBASIC14.82□□□□□ -0.04
LRRC28Q86X40 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 GPR89P-201ENST00000407924 1495 ntBASIC14.82□□□□□ -0.04
LRRC28Q86X40 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LRRC28Q86X40 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.82□□□□□ -0.04
LRRC28Q86X40 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 AC022532.1-201ENST00000624563 1728 ntBASIC14.81□□□□□ -0.04
LRRC28Q86X40 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 MTDHP3-201ENST00000594186 672 ntBASIC14.81□□□□□ -0.04
LRRC28Q86X40 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 AC008608.2-201ENST00000606089 416 ntBASIC14.81□□□□□ -0.04
LRRC28Q86X40 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LRRC28Q86X40 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
LRRC28Q86X40 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AP001269.4-201ENST00000609611 512 ntBASIC14.8□□□□□ -0.04
LRRC28Q86X40 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 KRT8P10-201ENST00000450021 1447 ntBASIC14.8□□□□□ -0.04
LRRC28Q86X40 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AL596087.1-201ENST00000400979 1969 ntBASIC14.8□□□□□ -0.04
LRRC28Q86X40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 AL603832.2-201ENST00000566195 2125 ntBASIC14.8□□□□□ -0.04
LRRC28Q86X40 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LRRC28Q86X40 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.8□□□□□ -0.04
LRRC28Q86X40 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms