Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 AC005034.1-201ENST00000426657 489 ntBASIC14.69□□□□□ -0.06
RTTNQ86VV8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.69□□□□□ -0.06
RTTNQ86VV8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RTTNQ86VV8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 HLA-A-202ENST00000376806 1854 ntBASIC14.68□□□□□ -0.06
RTTNQ86VV8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 RHOQP3-201ENST00000437982 621 ntBASIC14.68□□□□□ -0.06
RTTNQ86VV8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 SLC25A6P2-201ENST00000497974 877 ntBASIC14.68□□□□□ -0.06
RTTNQ86VV8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 AL008721.1-201ENST00000609964 604 ntBASIC14.68□□□□□ -0.06
RTTNQ86VV8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
RTTNQ86VV8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RTTNQ86VV8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 TUBB8P12-201ENST00000308911 1335 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 TUBB7P-202ENST00000428444 1305 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 TUBB8P7-204ENST00000567960 1332 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.67□□□□□ -0.06
RTTNQ86VV8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RTTNQ86VV8 MCCD1P2-201ENST00000423228 335 ntBASIC14.67□□□□□ -0.06
RTTNQ86VV8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms