Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 HCG4B-203ENST00000450128 991 ntBASIC16.32■□□□□ 0.2
SYVN1Q86TM6 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AC087163.2-201ENST00000457299 853 ntBASIC16.32■□□□□ 0.2
SYVN1Q86TM6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AC005829.1-201ENST00000570002 483 ntBASIC16.32■□□□□ 0.2
SYVN1Q86TM6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
SYVN1Q86TM6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 MRPL20P1-201ENST00000400819 433 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 PMS2P2-201ENST00000425039 1128 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AP006288.1-201ENST00000446065 395 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 MIR4492-201ENST00000581627 80 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 MPDU1-223ENST00000582151 728 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AC010654.1-201ENST00000615722 808 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 GGTLC5P-201ENST00000617623 998 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 REXO1L3P-201ENST00000622202 1288 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 AC004790.2-201ENST00000623588 572 ntBASIC16.31■□□□□ 0.2
SYVN1Q86TM6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.31■□□□□ 0.2
SYVN1Q86TM6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 GGT3P-204ENST00000453783 1664 ntBASIC16.3■□□□□ 0.2
SYVN1Q86TM6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 DNAJB3-202ENST00000449667 1266 ntBASIC16.3■□□□□ 0.2
SYVN1Q86TM6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 AL512652.2-201ENST00000625156 1716 ntBASIC16.3■□□□□ 0.2
SYVN1Q86TM6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SYVN1Q86TM6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms