Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 AL513523.2-202ENST00000427283 2040 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 EGFEM1P-202ENST00000431685 1563 ntBASIC13.66□□□□□ -0.22
TREML4Q6UXN2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TREML4Q6UXN2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AC073621.1-201ENST00000392730 636 ntBASIC13.65□□□□□ -0.22
TREML4Q6UXN2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 HLA-J-202ENST00000469281 1241 ntBASIC13.65□□□□□ -0.22
TREML4Q6UXN2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 MIR4751-201ENST00000578027 74 ntBASIC13.65□□□□□ -0.22
TREML4Q6UXN2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AC093783.1-201ENST00000612976 329 ntBASIC13.65□□□□□ -0.22
TREML4Q6UXN2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TREML4Q6UXN2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.65□□□□□ -0.23
TREML4Q6UXN2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
TREML4Q6UXN2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TREML4Q6UXN2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 AC079776.2-201ENST00000641154 1609 ntBASIC13.64□□□□□ -0.23
TREML4Q6UXN2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TREML4Q6UXN2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms