Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC139887.3-201ENST00000568585 713 ntBASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC025062.2-201ENST00000605477 670 ntBASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC092384.3-202ENST00000564646 2873 ntBASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 AC097637.2-201ENST00000624096 1997 ntBASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.45□□□□□ -0.1
ATPAF1Q5TC12 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MTHFR-217ENST00000641820 1569 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 LINC00982-205ENST00000420957 435 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 KRT18P67-201ENST00000432816 1264 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 AC079781.3-201ENST00000449110 356 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 AF186996.4-201ENST00000467186 377 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 AL031008.1-201ENST00000619963 541 ntBASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ATPAF1Q5TC12 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 EGFEM1P-202ENST00000431685 1563 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 RPS2P28-201ENST00000314255 741 ntBASIC14.43□□□□□ -0.1
ATPAF1Q5TC12 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms