Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 AL353135.1-201ENST00000606729 504 ntBASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PCGF3-213ENST00000620529 1899 ntBASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 AC112504.1-201ENST00000623415 1841 ntBASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC00242Q5T6M2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MIR4492-201ENST00000581627 80 ntBASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MPDU1-223ENST00000582151 728 ntBASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AC010331.1-201ENST00000611423 582 ntBASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.36□□□□□ -0.59
LINC00242Q5T6M2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC067930.6-201ENST00000623257 4947 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AC079776.2-201ENST00000641154 1609 ntBASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LINC00242Q5T6M2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms