Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 AL022342.1-201ENST00000400363 863 ntBASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
PCGF3Q3KNV8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 MST1L-201ENST00000442552 2185 ntBASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AC116407.3-201ENST00000623905 1129 ntBASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AC148477.5-201ENST00000625164 1645 ntBASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.76□□□□□ -0.05
PCGF3Q3KNV8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 AC136632.2-201ENST00000512891 861 ntBASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 AC004706.3-202ENST00000621574 984 ntBASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 AC005593.1-201ENST00000624894 515 ntBASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 AC004817.3-201ENST00000602957 2129 ntBASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.75□□□□□ -0.05
PCGF3Q3KNV8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms