Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 BTBD7P1-201ENST00000447253 1453 ntBASIC19.68■□□□□ 0.74
PDS5AQ29RF7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 AL139010.1-201ENST00000454878 894 ntBASIC19.68■□□□□ 0.74
PDS5AQ29RF7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 AC010336.2-201ENST00000564226 506 ntBASIC19.68■□□□□ 0.74
PDS5AQ29RF7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 PRORSD1P-202ENST00000563365 2154 ntBASIC19.68■□□□□ 0.74
PDS5AQ29RF7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PDS5AQ29RF7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AL592424.1-201ENST00000563624 1536 ntBASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 SPTLC1P1-201ENST00000447199 261 ntBASIC19.67■□□□□ 0.74
PDS5AQ29RF7 SERBP1P3-201ENST00000459980 809 ntBASIC19.67■□□□□ 0.74
PDS5AQ29RF7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC190387.1-201ENST00000551683 408 ntBASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC008738.7-201ENST00000609744 511 ntBASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PDS5AQ29RF7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 AL512361.1-201ENST00000554200 418 ntBASIC19.66■□□□□ 0.74
PDS5AQ29RF7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.66■□□□□ 0.74
PDS5AQ29RF7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PDS5AQ29RF7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms