Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.51■□□□□ 0.55
ASIC1P78348 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ASIC1P78348 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ASIC1P78348 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
ASIC1P78348 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ASIC1P78348 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 RNU1-129P-201ENST00000384064 167 ntBASIC18.5■□□□□ 0.55
ASIC1P78348 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.5■□□□□ 0.55
ASIC1P78348 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.5■□□□□ 0.55
ASIC1P78348 AC096734.2-201ENST00000562054 433 ntBASIC18.5■□□□□ 0.55
ASIC1P78348 AC145285.3-201ENST00000564603 959 ntBASIC18.5■□□□□ 0.55
ASIC1P78348 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 U1.21-201ENST00000580816 167 ntBASIC18.5■□□□□ 0.55
ASIC1P78348 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.5■□□□□ 0.55
ASIC1P78348 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 AL031055.1-201ENST00000606362 631 ntBASIC18.5■□□□□ 0.55
ASIC1P78348 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.5■□□□□ 0.55
ASIC1P78348 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ASIC1P78348 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ASIC1P78348 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.5■□□□□ 0.55
ASIC1P78348 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ASIC1P78348 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.49■□□□□ 0.55
ASIC1P78348 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.49■□□□□ 0.55
ASIC1P78348 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ASIC1P78348 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
ASIC1P78348 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.49■□□□□ 0.55
ASIC1P78348 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.49■□□□□ 0.55
ASIC1P78348 FDX1P1-201ENST00000449115 551 ntBASIC18.49■□□□□ 0.55
ASIC1P78348 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 AC034105.1-201ENST00000563488 319 ntBASIC18.49■□□□□ 0.55
ASIC1P78348 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.49■□□□□ 0.55
ASIC1P78348 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.49■□□□□ 0.55
ASIC1P78348 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ASIC1P78348 AL391005.1-201ENST00000623953 2435 ntBASIC18.49■□□□□ 0.55
ASIC1P78348 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.49■□□□□ 0.55
ASIC1P78348 AC026691.1-201ENST00000602502 2017 ntBASIC18.49■□□□□ 0.55
ASIC1P78348 IL9RP2-201ENST00000423948 1312 ntBASIC18.49■□□□□ 0.55
ASIC1P78348 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ASIC1P78348 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ASIC1P78348 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ASIC1P78348 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms