Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN12P56749 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN12P56749 SNX33P1-201ENST00000592116 1762 ntBASIC14.47□□□□□ -0.09
CLDN12P56749 AL512652.2-201ENST00000625156 1716 ntBASIC14.46□□□□□ -0.09
CLDN12P56749 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 LINC00982-205ENST00000420957 435 ntBASIC14.46□□□□□ -0.09
CLDN12P56749 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.46□□□□□ -0.09
CLDN12P56749 VENTXP7-201ENST00000475503 772 ntBASIC14.46□□□□□ -0.09
CLDN12P56749 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CLDN12P56749 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN12P56749 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN12P56749 AC012306.2-201ENST00000609350 630 ntBASIC14.46□□□□□ -0.09
CLDN12P56749 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.46□□□□□ -0.09
CLDN12P56749 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 AL031731.1-201ENST00000642131 2094 ntBASIC14.46□□□□□ -0.09
CLDN12P56749 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN12P56749 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN12P56749 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN12P56749 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN12P56749 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN12P56749 LINC02228-204ENST00000642115 2962 ntBASIC14.46□□□□□ -0.1
CLDN12P56749 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN12P56749 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN12P56749 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN12P56749 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN12P56749 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 AC126755.1-201ENST00000525846 6405 ntBASIC14.45□□□□□ -0.1
CLDN12P56749 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLDN12P56749 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN12P56749 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 KRT8P26-201ENST00000534154 1276 ntBASIC14.45□□□□□ -0.1
CLDN12P56749 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.45□□□□□ -0.1
CLDN12P56749 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN12P56749 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.45□□□□□ -0.1
CLDN12P56749 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN12P56749 AC002310.6-201ENST00000624451 1377 ntBASIC14.45□□□□□ -0.1
CLDN12P56749 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLDN12P56749 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN12P56749 INTS4P1-201ENST00000438455 1935 ntBASIC14.45□□□□□ -0.1
CLDN12P56749 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.44□□□□□ -0.1
CLDN12P56749 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN12P56749 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN12P56749 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN12P56749 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLDN12P56749 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN12P56749 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.44□□□□□ -0.1
CLDN12P56749 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN12P56749 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN12P56749 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLDN12P56749 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms