Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CLDN6P56747 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN6P56747 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CLDN6P56747 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
CLDN6P56747 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.85■□□□□ 0.13
CLDN6P56747 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.85■□□□□ 0.13
CLDN6P56747 AP006294.1-201ENST00000415407 339 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 RPS2P32-201ENST00000439199 892 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 RNA5SP410-201ENST00000516285 106 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.85■□□□□ 0.13
CLDN6P56747 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.85■□□□□ 0.13
CLDN6P56747 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN6P56747 AL133215.2-201ENST00000609242 977 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 SPTSSB-204ENST00000617024 1292 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 AC007431.3-201ENST00000623221 587 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.85■□□□□ 0.13
CLDN6P56747 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CLDN6P56747 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
CLDN6P56747 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.85■□□□□ 0.13
CLDN6P56747 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CLDN6P56747 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CLDN6P56747 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN6P56747 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 AC098614.1-201ENST00000368528 745 ntBASIC15.84■□□□□ 0.13
CLDN6P56747 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN6P56747 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN6P56747 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN6P56747 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN6P56747 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 AL512361.1-201ENST00000554200 418 ntBASIC15.84■□□□□ 0.13
CLDN6P56747 AL079307.3-201ENST00000556114 283 ntBASIC15.84■□□□□ 0.13
CLDN6P56747 AC044860.1-202ENST00000559481 777 ntBASIC15.84■□□□□ 0.13
CLDN6P56747 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.84■□□□□ 0.13
CLDN6P56747 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.84■□□□□ 0.13
CLDN6P56747 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.84■□□□□ 0.13
CLDN6P56747 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CLDN6P56747 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.84■□□□□ 0.13
CLDN6P56747 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CLDN6P56747 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.83■□□□□ 0.13
CLDN6P56747 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN6P56747 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CLDN6P56747 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN6P56747 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN6P56747 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN6P56747 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CLDN6P56747 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.83■□□□□ 0.12
CLDN6P56747 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLDN6P56747 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms