Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.8□□□□□ -0.04
GFRA1P56159 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.8□□□□□ -0.04
GFRA1P56159 AC067863.1-201ENST00000494933 530 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.8□□□□□ -0.04
GFRA1P56159 AC051619.7-201ENST00000568314 623 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 AL355385.1-201ENST00000606123 409 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
GFRA1P56159 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.8□□□□□ -0.04
GFRA1P56159 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.8□□□□□ -0.04
GFRA1P56159 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 AC008677.1-201ENST00000519230 1561 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GFRA1P56159 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.8□□□□□ -0.04
GFRA1P56159 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 AGGF1P2-201ENST00000426656 2106 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 FLJ38576-201ENST00000623820 2459 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GFRA1P56159 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
GFRA1P56159 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 TUBB3P1-201ENST00000405796 1332 ntBASIC14.79□□□□□ -0.04
GFRA1P56159 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.79□□□□□ -0.04
GFRA1P56159 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.79□□□□□ -0.04
GFRA1P56159 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.79□□□□□ -0.04
GFRA1P56159 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.79□□□□□ -0.04
GFRA1P56159 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.79□□□□□ -0.04
GFRA1P56159 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GFRA1P56159 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GFRA1P56159 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
GFRA1P56159 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.78□□□□□ -0.04
GFRA1P56159 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GFRA1P56159 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
GFRA1P56159 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GFRA1P56159 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.78□□□□□ -0.04
GFRA1P56159 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
GFRA1P56159 AL589702.1-201ENST00000641229 1509 ntBASIC14.78□□□□□ -0.04
GFRA1P56159 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
GFRA1P56159 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.78□□□□□ -0.04
GFRA1P56159 AC018529.1-201ENST00000613063 361 ntBASIC14.78□□□□□ -0.04
GFRA1P56159 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
GFRA1P56159 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.78□□□□□ -0.04
GFRA1P56159 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GFRA1P56159 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
GFRA1P56159 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GFRA1P56159 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GFRA1P56159 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.77□□□□□ -0.04
GFRA1P56159 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GFRA1P56159 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.77□□□□□ -0.04
GFRA1P56159 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GFRA1P56159 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GFRA1P56159 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.77□□□□□ -0.04
GFRA1P56159 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms