Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 MCCD1P2-201ENST00000423228 335 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.72■□□□□ 0.27
LIMK2P53671 AC004967.1-201ENST00000453589 447 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
LIMK2P53671 AC091167.2-201ENST00000579581 588 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.72■□□□□ 0.27
LIMK2P53671 AP001160.2-201ENST00000596071 487 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 AC004790.2-201ENST00000623588 572 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LIMK2P53671 AL031731.1-201ENST00000642131 2094 ntBASIC16.72■□□□□ 0.27
LIMK2P53671 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.72■□□□□ 0.27
LIMK2P53671 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.72■□□□□ 0.27
LIMK2P53671 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LIMK2P53671 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.72■□□□□ 0.27
LIMK2P53671 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LIMK2P53671 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 KRT8P39-201ENST00000396270 1433 ntBASIC16.71■□□□□ 0.27
LIMK2P53671 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LIMK2P53671 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LIMK2P53671 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK2P53671 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.71■□□□□ 0.27
LIMK2P53671 HCG4B-203ENST00000450128 991 ntBASIC16.71■□□□□ 0.27
LIMK2P53671 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
LIMK2P53671 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.71■□□□□ 0.27
LIMK2P53671 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LIMK2P53671 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.71■□□□□ 0.27
LIMK2P53671 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 AL365203.3-201ENST00000609742 2057 ntBASIC16.71■□□□□ 0.27
LIMK2P53671 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LIMK2P53671 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
LIMK2P53671 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
LIMK2P53671 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.7■□□□□ 0.26
LIMK2P53671 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.7■□□□□ 0.26
LIMK2P53671 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LIMK2P53671 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms