Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN3P51790 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN3P51790 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.12■□□□□ 0.49
CLCN3P51790 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN3P51790 HLA-A-202ENST00000376806 1854 ntBASIC18.12■□□□□ 0.49
CLCN3P51790 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN3P51790 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCN3P51790 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLCN3P51790 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 AL035633.1-201ENST00000406139 838 ntBASIC18.11■□□□□ 0.49
CLCN3P51790 MTND6P24-201ENST00000440466 518 ntBASIC18.11■□□□□ 0.49
CLCN3P51790 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 BANF1P1-201ENST00000553684 263 ntBASIC18.11■□□□□ 0.49
CLCN3P51790 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCN3P51790 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.11■□□□□ 0.49
CLCN3P51790 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.11■□□□□ 0.49
CLCN3P51790 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.11■□□□□ 0.49
CLCN3P51790 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CLCN3P51790 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 AC022211.2-201ENST00000585075 2527 ntBASIC18.11■□□□□ 0.49
CLCN3P51790 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLCN3P51790 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLCN3P51790 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 PCGF3-213ENST00000620529 1899 ntBASIC18.1■□□□□ 0.49
CLCN3P51790 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 AL589702.1-201ENST00000641229 1509 ntBASIC18.1■□□□□ 0.49
CLCN3P51790 AC100757.3-201ENST00000622361 1406 ntBASIC18.1■□□□□ 0.49
CLCN3P51790 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN3P51790 AC236430.1-201ENST00000402231 743 ntBASIC18.1■□□□□ 0.49
CLCN3P51790 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.1■□□□□ 0.49
CLCN3P51790 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.1■□□□□ 0.49
CLCN3P51790 AL512638.1-201ENST00000457493 794 ntBASIC18.1■□□□□ 0.49
CLCN3P51790 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN3P51790 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN3P51790 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN3P51790 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.1■□□□□ 0.49
CLCN3P51790 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CLCN3P51790 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLCN3P51790 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLCN3P51790 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLCN3P51790 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLCN3P51790 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLCN3P51790 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN3P51790 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCN3P51790 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN3P51790 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLCN3P51790 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms