Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 CYP2T1P-202ENST00000641596 2535 ntBASIC15.46■□□□□ 0.07
RNF144AP50876 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 AC104109.2-201ENST00000602919 1418 ntBASIC15.46■□□□□ 0.07
RNF144AP50876 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF144AP50876 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
RNF144AP50876 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.46■□□□□ 0.07
RNF144AP50876 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF144AP50876 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF144AP50876 FLJ16779-201ENST00000612722 7638 ntBASIC15.46■□□□□ 0.06
RNF144AP50876 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF144AP50876 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RNF144AP50876 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.45■□□□□ 0.06
RNF144AP50876 AC007967.2-201ENST00000432613 625 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 SLC25A1P1-201ENST00000528351 927 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 GGTLC5P-201ENST00000617623 998 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 AC131009.4-201ENST00000624048 1740 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 AL391005.1-201ENST00000623953 2435 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
RNF144AP50876 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNF144AP50876 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RNF144AP50876 PCDHA1-201ENST00000378133 2726 ntBASIC15.45■□□□□ 0.06
RNF144AP50876 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.44■□□□□ 0.06
RNF144AP50876 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNF144AP50876 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
RNF144AP50876 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
RNF144AP50876 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
RNF144AP50876 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNF144AP50876 IGHV3-22-201ENST00000520721 359 ntBASIC15.44■□□□□ 0.06
RNF144AP50876 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 AL662844.1-201ENST00000546340 181 ntBASIC15.44■□□□□ 0.06
RNF144AP50876 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.44■□□□□ 0.06
RNF144AP50876 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 CYP2A7P1-201ENST00000595391 815 ntBASIC15.44■□□□□ 0.06
RNF144AP50876 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.44■□□□□ 0.06
RNF144AP50876 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms