Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.66■□□□□ 0.1
CLK1P49759 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.66■□□□□ 0.1
CLK1P49759 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.66■□□□□ 0.1
CLK1P49759 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.66■□□□□ 0.1
CLK1P49759 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.66■□□□□ 0.1
CLK1P49759 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLK1P49759 MTDHP3-201ENST00000594186 672 ntBASIC15.66■□□□□ 0.1
CLK1P49759 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CLK1P49759 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
CLK1P49759 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLK1P49759 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLK1P49759 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 AL136379.1-201ENST00000623471 2642 ntBASIC15.65■□□□□ 0.1
CLK1P49759 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLK1P49759 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLK1P49759 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLK1P49759 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 ACTG1P4-201ENST00000425123 1122 ntBASIC15.65■□□□□ 0.1
CLK1P49759 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.65■□□□□ 0.1
CLK1P49759 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.65■□□□□ 0.1
CLK1P49759 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.65■□□□□ 0.1
CLK1P49759 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.65■□□□□ 0.1
CLK1P49759 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLK1P49759 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLK1P49759 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLK1P49759 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLK1P49759 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.64■□□□□ 0.1
CLK1P49759 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.64■□□□□ 0.09
CLK1P49759 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
CLK1P49759 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CLK1P49759 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLK1P49759 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CLK1P49759 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.64■□□□□ 0.09
CLK1P49759 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.64■□□□□ 0.09
CLK1P49759 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.64■□□□□ 0.09
CLK1P49759 AC008608.2-201ENST00000606089 416 ntBASIC15.64■□□□□ 0.09
CLK1P49759 IFNL4P1-201ENST00000607083 540 ntBASIC15.64■□□□□ 0.09
CLK1P49759 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLK1P49759 AL022326.1-202ENST00000641533 845 ntBASIC15.64■□□□□ 0.09
CLK1P49759 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms