Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 GGT4P-201ENST00000623672 1708 ntBASIC14.76□□□□□ -0.05
CSNK1A1P48729 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 AC021097.1-201ENST00000607902 574 ntBASIC14.76□□□□□ -0.05
CSNK1A1P48729 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 AC004877.2-201ENST00000623941 599 ntBASIC14.76□□□□□ -0.05
CSNK1A1P48729 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
CSNK1A1P48729 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CSNK1A1P48729 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.76□□□□□ -0.05
CSNK1A1P48729 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC025580.3-201ENST00000617932 1424 ntBASIC14.75□□□□□ -0.05
CSNK1A1P48729 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 GPAA1P2-202ENST00000606848 1787 ntBASIC14.75□□□□□ -0.05
CSNK1A1P48729 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AL139384.1-201ENST00000612143 3047 ntBASIC14.75□□□□□ -0.05
CSNK1A1P48729 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 MIR3909-201ENST00000579518 119 ntBASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AC140113.2-201ENST00000604370 208 ntBASIC14.75□□□□□ -0.05
CSNK1A1P48729 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
CSNK1A1P48729 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CSNK1A1P48729 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CSNK1A1P48729 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CSNK1A1P48729 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms