Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.66□□□□□ -0.06
SOX2P48431 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SOX2P48431 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SOX2P48431 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.65□□□□□ -0.06
SOX2P48431 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 AL365209.1-201ENST00000624418 6473 ntBASIC14.65□□□□□ -0.06
SOX2P48431 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.65□□□□□ -0.06
SOX2P48431 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 RCN1P1-201ENST00000400413 996 ntBASIC14.65□□□□□ -0.06
SOX2P48431 AL031133.1-201ENST00000406807 723 ntBASIC14.65□□□□□ -0.06
SOX2P48431 TMPOP1-202ENST00000424642 1267 ntBASIC14.65□□□□□ -0.06
SOX2P48431 DRAXINP1-201ENST00000437611 948 ntBASIC14.65□□□□□ -0.06
SOX2P48431 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SOX2P48431 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.65□□□□□ -0.06
SOX2P48431 AC074051.2-201ENST00000565115 352 ntBASIC14.65□□□□□ -0.06
SOX2P48431 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.65□□□□□ -0.06
SOX2P48431 AP002414.4-201ENST00000589764 1148 ntBASIC14.65□□□□□ -0.06
SOX2P48431 TERC-201ENST00000602385 541 ntBASIC14.65□□□□□ -0.06
SOX2P48431 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.65□□□□□ -0.06
SOX2P48431 AL139011.1-202ENST00000642063 584 ntBASIC14.65□□□□□ -0.06
SOX2P48431 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.65□□□□□ -0.06
SOX2P48431 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.65□□□□□ -0.06
SOX2P48431 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SOX2P48431 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.65□□□□□ -0.06
SOX2P48431 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SOX2P48431 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SOX2P48431 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SOX2P48431 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SOX2P48431 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.64□□□□□ -0.07
SOX2P48431 AP002383.4-201ENST00000442518 975 ntBASIC14.64□□□□□ -0.07
SOX2P48431 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SOX2P48431 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SOX2P48431 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 SIGLEC16-201ENST00000599858 1437 ntBASIC14.64□□□□□ -0.07
SOX2P48431 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.64□□□□□ -0.07
SOX2P48431 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SOX2P48431 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.64□□□□□ -0.07
SOX2P48431 AL590787.1-201ENST00000568856 1315 ntBASIC14.64□□□□□ -0.07
SOX2P48431 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SOX2P48431 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.63□□□□□ -0.07
SOX2P48431 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SOX2P48431 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SOX2P48431 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms