Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PKD1P1-201ENST00000458669 6805 ntBASIC15.96■□□□□ 0.15
SLC6A12P48065 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC6A12P48065 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC6A12P48065 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC6A12P48065 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC6A12P48065 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A12P48065 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A12P48065 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A12P48065 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC6A12P48065 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC6A12P48065 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A12P48065 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A12P48065 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC6A12P48065 AC093724.1-201ENST00000448659 1027 ntBASIC15.95■□□□□ 0.14
SLC6A12P48065 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A12P48065 KRT18P34-201ENST00000488218 1270 ntBASIC15.95■□□□□ 0.14
SLC6A12P48065 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A12P48065 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A12P48065 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A12P48065 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A12P48065 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A12P48065 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC6A12P48065 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
SLC6A12P48065 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC6A12P48065 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC6A12P48065 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A12P48065 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A12P48065 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A12P48065 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A12P48065 WASH6P-202ENST00000359512 1437 ntBASIC15.94■□□□□ 0.14
SLC6A12P48065 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A12P48065 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC6A12P48065 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 U82695.1-201ENST00000635752 1889 ntBASIC15.93■□□□□ 0.14
SLC6A12P48065 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A12P48065 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms