Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL12P48061 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL12P48061 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CXCL12P48061 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.32■□□□□ 0.2
CXCL12P48061 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 PKD1P1-201ENST00000458669 6805 ntBASIC16.32■□□□□ 0.2
CXCL12P48061 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CXCL12P48061 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL12P48061 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.32■□□□□ 0.2
CXCL12P48061 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL12P48061 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 AC135050.7-201ENST00000624508 2218 ntBASIC16.32■□□□□ 0.2
CXCL12P48061 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL12P48061 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL12P48061 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 ANKRD19P-201ENST00000338192 862 ntBASIC16.31■□□□□ 0.2
CXCL12P48061 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CXCL12P48061 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CXCL12P48061 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.31■□□□□ 0.2
CXCL12P48061 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.31■□□□□ 0.2
CXCL12P48061 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL12P48061 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CXCL12P48061 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL12P48061 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CXCL12P48061 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL12P48061 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.3■□□□□ 0.2
CXCL12P48061 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CXCL12P48061 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.3■□□□□ 0.2
CXCL12P48061 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CXCL12P48061 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CXCL12P48061 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CXCL12P48061 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCL12P48061 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCL12P48061 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.3■□□□□ 0.2
CXCL12P48061 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CXCL12P48061 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.3■□□□□ 0.2
CXCL12P48061 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms