Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHRNA4P43681 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 PMS2P4-201ENST00000412466 1052 ntBASIC16.71■□□□□ 0.27
CHRNA4P43681 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.71■□□□□ 0.27
CHRNA4P43681 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 AC021097.1-201ENST00000607902 574 ntBASIC16.71■□□□□ 0.27
CHRNA4P43681 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CHRNA4P43681 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CHRNA4P43681 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.71■□□□□ 0.27
CHRNA4P43681 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHRNA4P43681 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.71■□□□□ 0.26
CHRNA4P43681 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHRNA4P43681 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
CHRNA4P43681 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.7■□□□□ 0.26
CHRNA4P43681 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.7■□□□□ 0.26
CHRNA4P43681 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.7■□□□□ 0.26
CHRNA4P43681 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 AC074386.1-202ENST00000463561 864 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 PGAM5P1-201ENST00000518923 814 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 MIR3909-201ENST00000579518 119 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 AC068137.2-201ENST00000605408 478 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CHRNA4P43681 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHRNA4P43681 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.7■□□□□ 0.26
CHRNA4P43681 AC008741.2-201ENST00000612792 3115 ntBASIC16.7■□□□□ 0.26
CHRNA4P43681 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA4P43681 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CHRNA4P43681 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.69■□□□□ 0.26
CHRNA4P43681 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 KRT18P58-201ENST00000527480 1120 ntBASIC16.69■□□□□ 0.26
CHRNA4P43681 AC109635.5-201ENST00000533593 962 ntBASIC16.69■□□□□ 0.26
CHRNA4P43681 AP002472.1-201ENST00000577490 586 ntBASIC16.69■□□□□ 0.26
CHRNA4P43681 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.69■□□□□ 0.26
CHRNA4P43681 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CHRNA4P43681 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.69■□□□□ 0.26
CHRNA4P43681 CYP2T1P-202ENST00000641596 2535 ntBASIC16.69■□□□□ 0.26
CHRNA4P43681 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms