Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SLC1A1P43005 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A1P43005 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A1P43005 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC1A1P43005 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 MIR3909-201ENST00000579518 119 ntBASIC17.35■□□□□ 0.37
SLC1A1P43005 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 AC021097.1-201ENST00000607902 574 ntBASIC17.35■□□□□ 0.37
SLC1A1P43005 ACTL9-202ENST00000612068 1252 ntBASIC17.35■□□□□ 0.37
SLC1A1P43005 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SLC1A1P43005 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SLC1A1P43005 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SLC1A1P43005 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC1A1P43005 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC1A1P43005 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A1P43005 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SLC1A1P43005 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A1P43005 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.34■□□□□ 0.37
SLC1A1P43005 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC1A1P43005 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
SLC1A1P43005 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 FAM215A-202ENST00000632077 792 ntBASIC17.34■□□□□ 0.37
SLC1A1P43005 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC1A1P43005 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC1A1P43005 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC1A1P43005 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
SLC1A1P43005 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.33■□□□□ 0.37
SLC1A1P43005 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC1A1P43005 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC1A1P43005 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.33■□□□□ 0.37
SLC1A1P43005 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC1A1P43005 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.33■□□□□ 0.37
SLC1A1P43005 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC1A1P43005 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A1P43005 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A1P43005 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC1A1P43005 CXCL1P1-201ENST00000502804 216 ntBASIC17.33■□□□□ 0.36
SLC1A1P43005 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A1P43005 AL645728.2-201ENST00000641974 660 ntBASIC17.33■□□□□ 0.36
SLC1A1P43005 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SLC1A1P43005 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
SLC1A1P43005 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.33■□□□□ 0.36
SLC1A1P43005 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A1P43005 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A1P43005 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SLC1A1P43005 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A1P43005 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SLC1A1P43005 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC1A1P43005 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.33■□□□□ 0.36
SLC1A1P43005 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC1A1P43005 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC1A1P43005 AL592424.1-201ENST00000563624 1536 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms