Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC1P35251 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.48■□□□□ 0.39
RFC1P35251 AL031432.2-201ENST00000566714 459 ntBASIC17.48■□□□□ 0.39
RFC1P35251 AL928711.1-201ENST00000570165 459 ntBASIC17.48■□□□□ 0.39
RFC1P35251 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.48■□□□□ 0.39
RFC1P35251 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC1P35251 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RFC1P35251 AL645728.2-201ENST00000641974 660 ntBASIC17.48■□□□□ 0.39
RFC1P35251 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.48■□□□□ 0.39
RFC1P35251 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
RFC1P35251 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RFC1P35251 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RFC1P35251 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RFC1P35251 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.47■□□□□ 0.39
RFC1P35251 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC1P35251 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RFC1P35251 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RFC1P35251 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC1P35251 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC1P35251 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC1P35251 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.47■□□□□ 0.39
RFC1P35251 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.47■□□□□ 0.39
RFC1P35251 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.47■□□□□ 0.39
RFC1P35251 AC064836.3-201ENST00000607928 673 ntBASIC17.47■□□□□ 0.39
RFC1P35251 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.47■□□□□ 0.39
RFC1P35251 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RFC1P35251 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RFC1P35251 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.47■□□□□ 0.39
RFC1P35251 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFC1P35251 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RFC1P35251 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 RNU1-129P-201ENST00000384064 167 ntBASIC17.46■□□□□ 0.39
RFC1P35251 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.46■□□□□ 0.39
RFC1P35251 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.46■□□□□ 0.39
RFC1P35251 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.46■□□□□ 0.39
RFC1P35251 AC018845.2-201ENST00000568326 409 ntBASIC17.46■□□□□ 0.39
RFC1P35251 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RFC1P35251 U1.21-201ENST00000580816 167 ntBASIC17.46■□□□□ 0.39
RFC1P35251 AC120114.3-201ENST00000611923 658 ntBASIC17.46■□□□□ 0.39
RFC1P35251 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.46■□□□□ 0.39
RFC1P35251 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RFC1P35251 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RFC1P35251 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RFC1P35251 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms