Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
CHRNA5P30532 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHRNA5P30532 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.07■□□□□ 0.8
CHRNA5P30532 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.07■□□□□ 0.8
CHRNA5P30532 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 AL138688.1-201ENST00000624851 1594 ntBASIC20.07■□□□□ 0.8
CHRNA5P30532 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CHRNA5P30532 AL136982.4-201ENST00000437689 1740 ntBASIC20.07■□□□□ 0.8
CHRNA5P30532 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNA5P30532 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNA5P30532 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHRNA5P30532 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.07■□□□□ 0.8
CHRNA5P30532 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CHRNA5P30532 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHRNA5P30532 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.07■□□□□ 0.8
CHRNA5P30532 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.06■□□□□ 0.8
CHRNA5P30532 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.06■□□□□ 0.8
CHRNA5P30532 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 AL162726.2-201ENST00000438986 1017 ntBASIC20.06■□□□□ 0.8
CHRNA5P30532 RPL7P3-201ENST00000441388 714 ntBASIC20.06■□□□□ 0.8
CHRNA5P30532 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.06■□□□□ 0.8
CHRNA5P30532 FO681548.1-201ENST00000455617 1132 ntBASIC20.06■□□□□ 0.8
CHRNA5P30532 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.06■□□□□ 0.8
CHRNA5P30532 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHRNA5P30532 AC243960.2-201ENST00000600996 747 ntBASIC20.06■□□□□ 0.8
CHRNA5P30532 AC020765.3-201ENST00000613051 740 ntBASIC20.06■□□□□ 0.8
CHRNA5P30532 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CHRNA5P30532 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHRNA5P30532 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.06■□□□□ 0.8
CHRNA5P30532 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 MIR1247-201ENST00000408206 136 ntBASIC20.05■□□□□ 0.8
CHRNA5P30532 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA5P30532 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA5P30532 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA5P30532 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.05■□□□□ 0.8
CHRNA5P30532 AC133539.2-201ENST00000604757 467 ntBASIC20.05■□□□□ 0.8
CHRNA5P30532 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CHRNA5P30532 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA5P30532 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.05■□□□□ 0.8
CHRNA5P30532 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA5P30532 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.05■□□□□ 0.8
CHRNA5P30532 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHRNA5P30532 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHRNA5P30532 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms