Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN1P18031 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.39
PTPN1P18031 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN1P18031 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN1P18031 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN1P18031 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 GPS2P2-201ENST00000430745 888 ntBASIC17.51■□□□□ 0.39
PTPN1P18031 RBPMS2P1-201ENST00000437762 623 ntBASIC17.51■□□□□ 0.39
PTPN1P18031 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.51■□□□□ 0.39
PTPN1P18031 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN1P18031 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 AC004449.1-201ENST00000564240 433 ntBASIC17.51■□□□□ 0.39
PTPN1P18031 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN1P18031 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN1P18031 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN1P18031 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPN1P18031 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PTPN1P18031 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPN1P18031 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 OR6D1P-203ENST00000641209 4860 ntBASIC17.51■□□□□ 0.39
PTPN1P18031 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPN1P18031 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PTPN1P18031 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.5■□□□□ 0.39
PTPN1P18031 PCGF3-213ENST00000620529 1899 ntBASIC17.5■□□□□ 0.39
PTPN1P18031 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
PTPN1P18031 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PTPN1P18031 AC092171.3-201ENST00000610122 2651 ntBASIC17.5■□□□□ 0.39
PTPN1P18031 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.5■□□□□ 0.39
PTPN1P18031 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.5■□□□□ 0.39
PTPN1P18031 AC142381.1-201ENST00000426099 345 ntBASIC17.5■□□□□ 0.39
PTPN1P18031 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN1P18031 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN1P18031 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN1P18031 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN1P18031 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.5■□□□□ 0.39
PTPN1P18031 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN1P18031 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN1P18031 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPN1P18031 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPN1P18031 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPN1P18031 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTPN1P18031 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PTPN1P18031 FOXO1B-201ENST00000504678 1527 ntBASIC17.49■□□□□ 0.39
PTPN1P18031 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PTPN1P18031 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN1P18031 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN1P18031 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.49■□□□□ 0.39
PTPN1P18031 AC093028.1-201ENST00000622998 982 ntBASIC17.49■□□□□ 0.39
PTPN1P18031 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.49■□□□□ 0.39
PTPN1P18031 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PTPN1P18031 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms