Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCL2P13500 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL2P13500 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCL2P13500 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 AC004832.2-201ENST00000426397 482 ntBASIC14.45□□□□□ -0.1
CCL2P13500 FAM58CP-201ENST00000435741 640 ntBASIC14.45□□□□□ -0.1
CCL2P13500 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL2P13500 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 AC010327.4-202ENST00000591484 748 ntBASIC14.45□□□□□ -0.1
CCL2P13500 AL009183.1-201ENST00000603760 355 ntBASIC14.45□□□□□ -0.1
CCL2P13500 AC091812.2-201ENST00000619081 385 ntBASIC14.45□□□□□ -0.1
CCL2P13500 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
CCL2P13500 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL2P13500 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL2P13500 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL2P13500 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL2P13500 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 GGT4P-201ENST00000623672 1708 ntBASIC14.44□□□□□ -0.1
CCL2P13500 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 BX842568.4-201ENST00000421222 227 ntBASIC14.44□□□□□ -0.1
CCL2P13500 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 HLA-J-202ENST00000469281 1241 ntBASIC14.44□□□□□ -0.1
CCL2P13500 ALG1L5P-201ENST00000482043 771 ntBASIC14.44□□□□□ -0.1
CCL2P13500 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL2P13500 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL2P13500 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CCL2P13500 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL2P13500 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CCL2P13500 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL2P13500 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL2P13500 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL2P13500 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms