Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.73■□□□□ 0.11
LAMP1P11279 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.73■□□□□ 0.11
LAMP1P11279 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.73■□□□□ 0.11
LAMP1P11279 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LAMP1P11279 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LAMP1P11279 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.72■□□□□ 0.11
LAMP1P11279 MRPL20P1-201ENST00000400819 433 ntBASIC15.72■□□□□ 0.11
LAMP1P11279 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 AC079781.3-201ENST00000449110 356 ntBASIC15.72■□□□□ 0.11
LAMP1P11279 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 POU5F1P6-201ENST00000466990 990 ntBASIC15.72■□□□□ 0.11
LAMP1P11279 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 AC010654.1-201ENST00000615722 808 ntBASIC15.72■□□□□ 0.11
LAMP1P11279 FAM215A-202ENST00000632077 792 ntBASIC15.72■□□□□ 0.11
LAMP1P11279 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.72■□□□□ 0.11
LAMP1P11279 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LAMP1P11279 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LAMP1P11279 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.71■□□□□ 0.11
LAMP1P11279 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.71■□□□□ 0.11
LAMP1P11279 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LAMP1P11279 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.71■□□□□ 0.11
LAMP1P11279 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.71■□□□□ 0.11
LAMP1P11279 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.71■□□□□ 0.11
LAMP1P11279 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.71■□□□□ 0.11
LAMP1P11279 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 ACTL9-202ENST00000612068 1252 ntBASIC15.71■□□□□ 0.11
LAMP1P11279 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.71■□□□□ 0.11
LAMP1P11279 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.71■□□□□ 0.11
LAMP1P11279 AC012569.1-201ENST00000591191 1524 ntBASIC15.71■□□□□ 0.11
LAMP1P11279 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.71■□□□□ 0.11
LAMP1P11279 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 AL603832.2-201ENST00000566195 2125 ntBASIC15.71■□□□□ 0.11
LAMP1P11279 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LAMP1P11279 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LAMP1P11279 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.71■□□□□ 0.11
LAMP1P11279 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
LAMP1P11279 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.1
LAMP1P11279 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.71■□□□□ 0.1
LAMP1P11279 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
LAMP1P11279 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LAMP1P11279 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LAMP1P11279 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 AC010491.1-201ENST00000563101 2797 ntBASIC15.7■□□□□ 0.1
LAMP1P11279 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LAMP1P11279 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms